Repbase Reports |
|---|
| 2008, Volume 8, Issue 5 |
| May 31, 2008 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 611 |
Rehavkus-N1_NV |
|||
|---|---|---|---|
A family of non-autonomous Rehavkus transposons - a consensus. |
|||
|
Submitted: 27-May-2008 |
Accepted: 31-May-2008 |
||
|
Key Words: Rehavkus; DNA transposon; Transposable Element; Nonautonomous; Interspersed repeat; DNA-5-9_NV; former DNA-8-2_NV; Rehavkus-N1_NV |
|||
|
Source: Nematostella |
Organism: Nematostella |
Taxonomy: Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae |
|
| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
||
|
Title: Rehavkus transposons in the starlet sea anemone genome. |
|||
|
Journal: Repbase Reports 8(5), 611-611 (2008) |
|||
Abstract: Rehavkus-N1_NV is a consensus sequence of a family of non-autonomous Rehavkus transposons. The Rehavkus-N1_NV transposon is characterized by 3000-bp TIRs and 9-bp target site duplications. Classification is based on a structure of termini conserved in all known Rehavkuses. A minor fraction of Rehavkus-N1_NV elements are flanked by 8-bp TSDs, probably, due to mutations. Rehavkus-N1_NV is a composite transposon: it harbors an inserted copy of DNA-5-9_NV, which is masked by Ns.The 3000-bp TIR is composed of two unique sequences (pos. 1-576 and 740-1352) and a 118-bp minisatellite.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||