Repbase Reports

2008, Volume 8, Issue 2
February 29, 2008
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 57

Chapaev3-3_HM

Chapaev3-3_HM is an autonomous DNA transposon - consensus.

Submitted:
29-Feb-2008
Accepted:
29-FEB-2008
Key Words:
Chapaev; DNA transposon; Transposable Element; Chapaev3; Chapaev3-3_HM
Source:
Petromyzon marinus
Organism:
Petromyzon marinus
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Chapaev3, a distinctive group of animal Chapaev transposons.
Journal:
Repbase Reports 8(2), 57-57 (2008)
Abstract:
Chapaev3-3_HM belongs to the Chapaev3 group of the Chapaev superfamily of DNA transposons (see comments on Chapaev3-2_PM). Chapaev3-3_HM is a very young family of lamprey Chapaev3 transposons: genomic copies of Chapae3-3_HM elements are ~99.5% identical to their consensus sequence, which was derived from multiple alignment of 11 Chapaev3-3_HM elements. Chapaev3-3_HM contains 13-bp terminal inverted repeats and encodes a 558-aa transposase.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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