Repbase Reports

2008, Volume 8, Issue 10
October 31, 2008
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1345

Kolobok-N1_DR

nonautonomous Kolobok transposons from zebrafish- a consensus.

Submitted:
10-Oct-2008
Accepted:
31-Oct-2008
Key Words:
Kolobok; DNA transposon; Transposable Element; Nonautonomous; hairpin; Kolobok-N1_DR
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[1] Authors:
Bao,W. and Jurka,J.
Title:
Kolobok-type transposons from zebrafish.
Journal:
Repbase Reports 8(10), 1345-1345 (2008)
Abstract:
This is a ancient transposon, built from copies which are ~90% identical to the consensus. The TIR is half of the whole length (~400 bp), making a perfect hairpin structure. The TSD is putatively TTAA tetranucleotide. Its termini are more similar to that of most Koloboks rather than to PiggyBacs.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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