Repbase Reports

2007, Volume 7, Issue 9
September 30, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 984

PREM1A_ZM_I

LTR retrotransposon from maize: internal portion.

Submitted:
18-Sep-2007
Accepted:
30-Sep-2007
Key Words:
LTR Retrotransposon; Transposable Element; PREM1A_ZM_I
Source:
Zea mays
Organism:
Zea mays
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea
[1] Authors:
Obukhanych,T. and Jurka,J.
Title:
PREM1A_ZM.
Journal:
Repbase Reports 7(9), 984-984 (2007)
Abstract:
This is an internal portion of PREM1A_ZM LTR retrotransposon from Zea mays. Only a single complete copy could be found. It has very long LTRs (~3.3 kb), which are 99% similar to each other, and 5 bp-long TSDs (GGGGA). Part of PREM1A_ZM sequence is highly similar (93%) to PREM1 LTR retrotransposon from Zea mays and is likely to be a complete version of PREM1.
Derived:
Positions 20741 19073 Accession No AY371488 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:

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