Repbase Reports

2007, Volume 7, Issue 7
July 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 587

hAT-2_NV

Starlet sea anemone hAT-2_NV autonomous DNA transposon - consensus.

Submitted:
06-Jul-2007
Accepted:
31-Jul-2007
Key Words:
hAT; DNA transposon; Transposable Element; 8-bp TSDs; former NVREP296; hAT-2_NV
Source:
Nematostella vectensis
Organism:
Nematostella vectensis
Taxonomy:
Eukaryota; Metazoa; Cnidaria; Anthozoa; Zoantharia; Actiniaria; Edwardsiidae; Nematostella
[2] Authors:
Kapitonov,V. and Jurka,J.
Title:
hAT-2_NV - a family of autonomous DNA transposons from the starlet sea anemone genome.
Journal:
Repbase Reports 7(7), 587-587 (2007)
Abstract:
The genome contains >10 copies that are less than 2% divergent from the consensus. The 684-aa transposase is encoded by two exons (pos. 607-1711, 1949-2898). The transposase contains the ZnF_TTF zinc finger domain (aa positions 50-125).
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Putnam,N.H., Srivastava,M., Hellsten,U., Dirks,B., Chapman,J., Salamov,A., Terry,A., Shapiro,H., Lindquist,E., Kapitonov,V.V., Jurka,J., Genikhovich,G., Grigoriev,I.V., Lucas,S.M., Steele,R.E., Finnerty,J.R., Technau,U., Martindale,M.Q. and Rokhsar,D.S.
    Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.
    Science 317(5834), 86-94 (2007)

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