Repbase Reports

2007, Volume 7, Issue 7
July 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 661

Penelope1_Dw

Penelope1 retrotransposon from D. willistoni - a consensus sequence.

Submitted:
25-Jul-2007
Accepted:
31-Jul-2007
Key Words:
Penelope; Non-LTR Retrotransposon; Transposable Element; retrotransposon; Penelope-like element; reverse transcriptase; GIY-YIG endonuclease; Penelope1_Dw
Source:
Drosophila willistoni
Organism:
Drosophila willistoni
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
[1] Authors:
Arkhipova,I.R.
Title:
Penelope retrotransposons from Drosophila willistoni.
Journal:
Repbase Reports 7(7), 661-661 (2007)
Abstract:
Penelope1_Dw from Drosophila willistoni is 68% identical to Penelope from D. virilis (U49102), and 70% identical to Penelope2_Dw, another D. wllistoni Penelope element. There are about 60 copies of Penelope1_Dw in the sequenced part of the D. willistoni genome, most of which differ from the consensus by 1-5% but can differ as much as 10-15%. Most of the copies are 5'-truncated, and only one appears to be fully intact (AAQB01006297) and is arranged in a characteristic partial-tandem, forming "pseudo-LTRs".
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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