Repbase Reports

2007, Volume 7, Issue 6
June 30, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 353

Kolobok-N16_NV

A family of non-autonomous Kolobok transposons - a consensus.

Submitted:
29-Jun-2007
Accepted:
30-Jun-2007
Key Words:
Kolobok; DNA transposon; Interspersed Repeat; Nonautonomous; former NVREP103; Kolobok-N16_NV
Source:
Nematostella vectensis
Organism:
Nematostella vectensis
Taxonomy:
Eukaryota; Metazoa; Cnidaria; Anthozoa; Zoantharia; Actiniaria; Edwardsiidae; Nematostella
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Non-autonomous Kolobok transposons in the starlet sea anemone genome.
Journal:
Repbase Reports 7(6), 353-353 (2007)
Abstract:
Kolobok-N16_NV is a consensus sequence of a family of non-autonomous Kolobok transposons. The Kolobok-N16_NV transposon is characterized by ~1000-bp TIRs and TTAA target site duplications. This transposon contains insertions of Penelope-5_NV, DNA-5-2_NV, and DNA-7-5_NV elements (they are masked out by Ns). This family is composed of ~300 elements that are ~3% divergent from the consensus sequence.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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