Repbase Reports

2007, Volume 7, Issue 5
May 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 156

Harbinger-1_NV

A family of autonomous Harbinger transposons - a consensus.

Submitted:
31-May-2007
Accepted:
31-May-2007
Key Words:
Harbinger; DNA transposon; Interspersed Repeat; Harbinger-1_NV
Source:
Nematostella vectensis
Organism:
Nematostella vectensis
Taxonomy:
Eukaryota; Metazoa; Cnidaria; Anthozoa; Zoantharia; Actiniaria; Edwardsiidae; Nematostella
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Harbinger transposons in the starlet sea anemone genome.
Journal:
Repbase Reports 7(5), 156-156 (2007)
Abstract:
Harbinger-1_NV is a consensus sequence of a family of autonomous Harbinger transposons that were active in the Nematostella vectensis genome in a last few million years. The Harbinger-1_NV transposon is characterized by 27-bp terminal inverted repeats, 3-bp target site duplications, and it encodes two proteins: (i) the 344-aa Harbinger-1_NV1p transposase and (ii) the 153-aa Harbinger-1_NV2p Myb-like DNA-binding protein.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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