Repbase Reports

2007, Volume 7, Issue 1
January 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 104

SHAMUDRAV_MT

A MuDr like DNA transposon from Medicago truncatula.

Submitted:
15-Jan-2007
Accepted:
31-Jan-2007
Key Words:
MuDR; DNA transposon; Interspersed Repeat; ORF; Interspersed; repeat; TIR; TSD; SHAMUDRAV_MT
Source:
Medicago truncatula
Organism:
Medicago truncatula
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Shankar,R. and Jurka,J.
Title:
SHAMUDRAV_MT: A MuDR type DNA transposon from barrel medic.
Journal:
Repbase Reports 7(1), 104-104 (2007)
Abstract:
The complete sequence is present in very low number and rarely of full length. The sequence has characteristics of MuDr transposon in terms of TIRs as well as an ORF containing completely intact MuDr class transposase. Also this sequence has another ORF in antisense, an another feature of MuDr type transposons. Also the sequence is flanked by 9 bp TSD, rich in poly-T.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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