Repbase Reports

2007, Volume 7, Issue 1
January 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 92

SHALINE15_MT

A LINE element from Medicago truncatula.

Submitted:
21-Jan-2007
Accepted:
31-Jan-2007
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; ORF; LINE; Interspersed; repeat; SHALINE15_MT
Source:
Medicago truncatula
Organism:
Medicago truncatula
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Shankar,R. and Jurka,J.
Title:
SHALINE15_MT: A LINE element from barrel medic.
Journal:
Repbase Reports 7(1), 92-92 (2007)
Abstract:
The LINE element is poorly conserved across the genome. Almost all instances are of incomplete length and the copies are present with heavily truncated 5' end, mostly. This sequence has domains for RNA recognition motif, ORF1p of CCHC zinc finger binding protein, endo/exophosphatase and reverse transcriptase.
Derived:
Positions 47111 53482 Accession No AC147498 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:

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