Repbase Reports

2007, Volume 7, Issue 1
January 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 90

SHALINE12_MT

A LINE element from Medicago truncatula.

Submitted:
19-Jan-2007
Accepted:
31-Jan-2007
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; LINE; Interspersed; repeat; ORF; Poly-A tail; SHALINE12_MT
Source:
Medicago truncatula
Organism:
Medicago truncatula
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Shankar,R. and Jurka,J.
Title:
SHALINE12_MT: A LINE element from barrel medic.
Journal:
Repbase Reports 7(1), 90-90 (2007)
Abstract:
The element seems to be autonomous, though present in genome in moderate copy number. The central 5' half is highly variable while the terminals are well conserved. Two different ORFs in a single frame are present of which one codes for RT polymerase while the first one codes for CCHC type zinc finger protein.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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