Repbase Reports

2007, Volume 7, Issue 1
January 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 88

SHALINE10_MT

A LINE element from Medicago truncatula.

Submitted:
02-Jan-2007
Accepted:
31-Jan-2007
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; Interspersed; repeat; retroposon; non-LTR; Poly-A tail; ORF; SHALINE10_MT
Source:
Medicago truncatula
Organism:
Medicago truncatula
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Shankar,R. and Jurka,J.
Title:
SHALINE10_MT: A LINE element from barrel medic.
Journal:
Repbase Reports 7(1), 88-88 (2007)
Abstract:
The sequence has 2 ORFs. First one has domain for zinc finger CCHC type while second ORF has domain for LINE reverse transcriptase. 5' is incomplete but very close to start. 3' is well conserved. In general the element is present in Medicago genome in very few long copies.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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