Repbase Reports

2007, Volume 7, Issue 1
January 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 78

SHACOP7_I_MT

Internal region of copia-type LTR retroposon, SHACOP7_MT, from Medicago truncatula.

Submitted:
15-Jan-2007
Accepted:
31-Jan-2007
Key Words:
Copia; LTR Retrotransposon; Interspersed Repeat; LTR; retroposon; internal region; Interspersed; repeat; terminal repeat; ORF; SHACOP7_I_MT
Source:
Medicago truncatula
Organism:
Medicago truncatula
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Shankar,R. and Jurka,J.
Title:
SHACOP7_MT: LTR retroposon from barrel medic.
Journal:
Repbase Reports 7(1), 78-78 (2007)
Abstract:
The internal region sequence is present in few copies and exists in highly variable forms, showing poor conservation across the sequences. It has intact domains for integrase and RT polymerase.
Derived:
Positions 29656 34214 Accession No CT573421 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:

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