Repbase Reports

2007, Volume 7, Issue 1
January 31, 2007
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1

CALYPSHAN2_I_MT

Internal region of LTR retroposon, CALYPSHAN2_MT, from Medicago truncatula.

Submitted:
28-Jan-2007
Accepted:
31-Jan-2007
Key Words:
Gypsy; LTR Retrotransposon; Interspersed Repeat; LTR; retroposon; Internal; Interspersed; terminal; ORF; CALYPSHAN2_I_MT
Source:
Medicago truncatula
Organism:
Medicago truncatula
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Shankar,R. and Jurka,J.
Title:
CALYPSHAN2_MT: LTR retroposon from barrel medic.
Journal:
Repbase Reports 7(1), 1-1 (2007)
Abstract:
The internal regions has intact domains for gag and pol in two ORFs with Gypsy-like arrangement. It has domains for aspartyl protease before polymerase and RNAse and integrase after polymerase, respectively.
Derived:
Positions 56449 65284 Accession No AC147496 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:

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