Repbase Reports

2006, Volume 6, Issue 9
September 30, 2006
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 465

hAT-12_XT

An autonomous family of hAT transposons - a consensus.

Submitted:
29-Sep-2006
Accepted:
30-Sep-2006
Key Words:
hAT; DNA transposon; Interspersed Repeat; autonomous; hAT-12_XT
Source:
Xenopus tropicalis
Organism:
Xenopus tropicalis
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
hAT-12_XT, a family of autonomous hAT DNA transposons from frog.
Journal:
Repbase Reports 6(9), 465-465 (2006)
Abstract:
hAT-12_XT elements belong to an autonomous family of hAT DNA transposons characterized by 8-bp TSDs and 18-bp TIRs. The genome harbors only several copies of hAT-12_XT (~95% identical to the consensus). The consensus sequence is probably incomplete; the N-terminal portion of the hAT transposase is not encoded by the consensus. The consensus sequence contains an insertion of the CR1-1A_XT retrotransposon, which is masked by Ns.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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