Repbase Reports

2006, Volume 6, Issue 9
September 30, 2006
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 463

hAT-12N1A_XT

A nonautonomous family of hAT transposons - a consensus.

Submitted:
29-Sep-2006
Accepted:
30-Sep-2006
Key Words:
hAT; DNA transposon; Interspersed Repeat; Nonautonomous; non-autonomous; hAT-12_XT; hAT-12N1_XT; hAT-12N1A_XT
Source:
Xenopus tropicalis
Organism:
Xenopus tropicalis
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
hAT-12N1A_XT, a family of nonautonomous hAT DNA transposons from frog.
Journal:
Repbase Reports 6(9), 463-463 (2006)
Abstract:
The genome contains several thousand copies of the hAT-12N1A_XT nonautonomous DNA transposon. These copies have been transposed relatively long time ago (they are 10% divergent from the consensus sequence). This transposon is characterized by 8-bp TSDs and 19-bp TIRs. The hAT-12N1A_XT family have been transposed by a transposase encoded by autonomous transposons ancestral to hAT-12_XT. The hAT-12N1A_XT and hAT-12_XT consensus sequences share the 90% identical ~110-bp and 90-bp 5' and 3' termini.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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