Repbase Reports

2006, Volume 6, Issue 9
September 30, 2006
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 458

Harbinger-N7A_XT

A nonautonomous family of Harbinger transposons - a consensus.

Submitted:
29-Sep-2006
Accepted:
30-Sep-2006
Key Words:
Harbinger; DNA transposon; Interspersed Repeat; Nonautonomous; non-autonomous; Harbinger-N7_XT; Harbinger-N7A_XT
Source:
Xenopus tropicalis
Organism:
Xenopus tropicalis
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Harbinger-N7_XT, a family of nonautonomous Harbinger DNA transposons from frog.
Journal:
Repbase Reports 6(9), 458-458 (2006)
Abstract:
The genome contains a few hundred Harbinger-N7A_XT elements. They are characterized by 24-bp TIRs (3 mismatches) and 3-bp TWA target site duplications in the cacTWAgtg target sites.Youngest elements are 2% divergent from the consensus (they were immobile during the last several million years). Harbinger-N7A_XT is the youngest subfamily of Harbinger-N7_XT.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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