Repbase Reports

2006, Volume 6, Issue 9
September 30, 2006
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 449

Harbinger-N11_XT

A nonautonomous family of Harbinger transposons - a consensus.

Submitted:
29-Sep-2006
Accepted:
30-Sep-2006
Key Words:
Harbinger; DNA transposon; Interspersed Repeat; Nonautonomous; non-autonomous; Harbinger-N11_XT
Source:
Xenopus tropicalis
Organism:
Xenopus tropicalis
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Harbinger-N11_XT, a family of nonautonomous Harbinger DNA transposons from frog.
Journal:
Repbase Reports 6(9), 449-449 (2006)
Abstract:
The genome contains several thousand copies of the Harbinger-N11_XT nonautonomous DNA transposons. They are characterized by the 37-bp TIRs and 3-bp TWA target site duplications. Sometimes they form doublets. Given that some copies are identical to each other, this family might be still mobile. Among 6375 full-size copies identified in the sequenced genome, only 241 copies are less than 85% identical to the consensus sequence.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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