Repbase Reports

2006, Volume 6, Issue 6
June 30, 2006
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 288

L1-4A_MD

L1-4A_MD: a subfamily of LINE1 - consensus.

Submitted:
18-Jun-2006
Accepted:
30-Jun-2006
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; Non-autonomous; L1-4A_ME; L1-4A_MD
Source:
Monodelphis domestica
Organism:
Monodelphis domestica
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[2] Authors:
Jurka,J.
Title:
L1-4A_MD: An old LINE1 subfamily from Monodelphis domestica.
Journal:
Repbase Reports 6(6), 288-288 (2006)
Abstract:
There are >50,000 copies of this subfamily per haploid genome. Average identity to consensus is ~73%. The closest subfamily is L1-4A_ME from wallaby (~90% identical at the consensus level).
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence, version 4 assembly.
    Initial data release

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