Repbase Reports

2005, Volume 5, Issue 9
September 30, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 277

RIRE8C_I

RIRE8C: Gypsy-type LTR-retrotransposon from rice (internal portion).

Submitted:
30-Sep-2005
Accepted:
30-Sep-2005
Key Words:
Gypsy; LTR Retrotransposon; Interspersed Repeat; RIRE8C_LTR
Source:
Oryza sativa
Organism:
Oryza sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza
[2] Authors:
Jurka,J.
Title:
RIRE8C: Gypsy-type LTR retrotransposon - long terminal repeat and the internal portion.
Journal:
Repbase Reports 5(9), 277-277 (2005)
Abstract:
LTRs are 97% identical. Protein similarity to Ty3-gypsy was identified in Genbank annotation (ref. 1).
Derived:
Positions 50541 44795 Accession No AC146946 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Buell,C., Yuan,Q., Ouyang,S., Liu,J., Wang,A., Maiti,R., Lin,H., Hamilton,J., Jones,K., Tallon,L., Feldblyum,T., Tsitrin,T., Kim,M., Jin,S., Fadrosh,D., Vuong,H., Overton II,L., Weaver,B., Johri,S., Lewis,M., Utterback,T., Van Aken,S., Wortman,J., Haas,B., Koo,H., Zismann,V., Hsiao,J., de Vazeilles,A., White,O., Salzberg,S. and Fraser,C.
    None.
    Unpublished, 2005

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