Repbase Reports

2005, Volume 5, Issue 9
September 30, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 268

MuDR4_OS

MuDR-type DNA transposon from O. sativa.

Submitted:
30-Sep-2005
Accepted:
30-Sep-2005
Key Words:
MuDR; DNA transposon; Interspersed Repeat
Source:
Oryza sativa
Organism:
Oryza sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza
[2] Authors:
Jurka,J.
Title:
MuDR4_OS: A complete prototypic sequence of a new MuDR-type autonomous DNA transposon family from rice.
Journal:
Repbase Reports 5(9), 268-268 (2005)
Abstract:
Present in over 50 closely similar copies in currently available data. Similarity of its protein-coding portion to MuDR transposase was observed in ref. 1 and other annotations. However, this is the first complete example of MuDR4_OS element, including TIRs, which provides evidence that the observed protein coding regions are parts of a DNA transposon family.
Derived:
Positions 99120 106729 Accession No AC138004 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Buell,C.R., Yuan,Q., Ouyang,S., Liu,J., Gansberger,K., Jones,K.M., Overton II,L.L., Tsitrin,T., Kim,M.M., Bera,J.J., Jin,S.S., Fadrosh,D.W., Tallon,L.J., Koo,H., Zismann,V., Hsiao,J., Blunt,S., Vanaken,S.S., Riedmuller,S.B., Utterback,T.T., Feldblyum,T.V., Yang,Q.Q., Haas,B.J., Suh,B.B., Peterson,J.J., Quackenbush,J., White,O., Salzberg,S.L. and Fraser,C.M.
    Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence.
    Unpublished (2004)

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