Repbase Reports

2005, Volume 5, Issue 8
August 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 217

RETROSOR2_I

Gypsy-type LTR-retrotransposon from rice (internal portion).

Submitted:
31-Aug-2005
Accepted:
31-Aug-2005
Key Words:
Gypsy; LTR Retrotransposon; Interspersed Repeat; RETROSOR2_LTR
Source:
Oryza sativa
Organism:
Oryza sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza
[2] Authors:
Jurka,J.
Title:
RETROSOR2: Gypsy-type LTR retrotransposon from rice.
Journal:
Repbase Reports 5(8), 217-217 (2005)
Abstract:
LTRs are ~96% identical to each other. This is an older family with multiple diverged and incomplete copies. A coding portion of the internal region was annotated in Genbank.
Derived:
Positions 51032 61698 Accession No AC115688 Genbank
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Buell,C.R., Yuan,Q., Ouyang,S., Liu,J., Gansberger,K., Jones,K.M., Tsitrin,T., Kim,M.M., Bera,J.J., Jin,S.S., Tallon,L.J., Koo,H., Zismann,V., Hsiao,J., Blunt,S., Riedmuller,S.B., Utterback,T.T., Feldblyum,T.V., Haas,B.J., Suh,B.B., Peterson,J.J., Quackenbush,J., Salzberg,S.L. and Fraser,C.M.
    Oryza sativa chromosome 3 BAC OJ1324_A07 genomic sequence.
    Unpublished (2004)

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