Repbase Reports

2005, Volume 5, Issue 8
August 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 209

OSLINE1-5

L1-like non-LTR retrotransposon from rice.

Submitted:
31-Aug-2005
Accepted:
31-Aug-2005
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; OSLINE1-5
Source:
Oryza sativa (japonica cultivar-group)
Organism:
Oryza sativa (japonica cultivar-group)
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza; Oryza sativa
[1] Authors:
Jurka,J.
Title:
OSLINE1-5: L1-type non-LTR retrotransposon from rice (reconstructed from two pieces).
Journal:
Repbase Reports 5(8), 209-209 (2005)
Abstract:
The 5' end is uncertain. The sequence is relatively young and spans from 65433 to 59347 in Genbank sequence with Acc. No. BX649219, but it includes a solo LTR (SZ-20LTR) inserted at positions 61030-59636. Therefore the final sequence has been reconstructed from two separate pieces after eliminating a duplicated target CTAC. For this reason the sequence is labeled as "consensus.".
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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