Repbase Reports

2005, Volume 5, Issue 7
July 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 191

SINE2-7_SP

A family of SINE retrotransposons - a consensus sequence.

Submitted:
31-Jul-2005
Accepted:
31-Jul-2005
Key Words:
SINE2; SINE; Interspersed Repeat; non-autonomous; non-LTR retrotransposon; tRNA; Tc1-N2_SP; SINE2-7_SP
Source:
Strongylocentrotus purpuratus
Organism:
Strongylocentrotus purpuratus
Taxonomy:
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
SINE2-7_SP, a family of SINE2 retrotransposons in the sea urchin genome.
Journal:
Repbase Reports 5(7), 191-191 (2005)
Abstract:
The genome harbors ~1000 copies of SINE2-7_SP elements that are ~95% identical to the SINE2-7_SP consensus sequence. The tRNA-like pol III 70-bp 5' terminus of SINE2-7_SP is only ~70% identical to these in SINE2-2_SP, SINE2-3_SP, and SINE2-4_SP. A copy of SINE2-7_SP (74% identity) has been multiplied in the genome as an internal portion of Tc1-N2_SP.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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