Repbase Reports

2005, Volume 5, Issue 6
June 30, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 147

HERV4_I

Human endogenous retrovirus HERV4 - a consensus.

Submitted:
30-Jun-2005
Accepted:
30-Jun-2005
Key Words:
Endogenous Retrovirus; Interspersed Repeat; LTR; Internal sequence of human endogenous retrovirus
Source:
Homo sapiens
Organism:
Homo sapiens
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo
[1] Authors:
Polavarapu,N., Bowen,N.J. and Mcdonald,J.F.
Title:
Consensus sequence of human endogenous retrovirus HERV4.
Journal:
Repbase Reports 5(6), 147-147 (2005)
Abstract:
LTRs of the element are deposited as HERV4_LTR in repbase. There is ~8-10% divergence between HERV4 elements and their consensus sequence.The HERV4 consensus sequence encodes reverse transcriptase, RNase H, integrase proteins. Pol proteins are 40% identical to baboon endogenous retrovirus. HERV4 intraelement LTR identity is 82% to 90%. Polymerase region: 1966..5715.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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