Repbase Reports

2005, Volume 5, Issue 5
May 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 129

RETROFIT3_LTR

Rice copia-type LTR retrotransposon RETROFIT3_LTR, long terminal repeat.

Submitted:
31-May-2005
Accepted:
31-May-2005
Key Words:
Copia; LTR Retrotransposon; Interspersed Repeat; RETROFIT; RETROFIT2; RETROFIT3_LTR
Source:
Oryza sativa
Organism:
Oryza sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza
[1] Authors:
Jurka,J.
Title:
Copia-type RETROFIT3 LTR retrotransposon.
Journal:
Repbase Reports 5(5), 129-129 (2005)
Abstract:
RETROFIT3 is ~69% identical to RETROFIT2 and 73% to RETROFIT It appears to have intact protein-coding ORF and there is only a single mutation between LTRs of RETROFIT3. However, similarities to other RETROFIT LTRs are lower, sometimes undetectable.
Derived:
Positions 77572 77248 Accession No AL713928 Genbank
Download Sequence - Format:
IG, EMBL, FASTA
References:

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