Repbase Reports

2005, Volume 5, Issue 5
May 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 118

Gypsy-28-I_DR

An internal portion of the Gypsy-28_DR LTR retrotransposon - a consensus sequence.

Submitted:
31-May-2005
Accepted:
31-May-2005
Key Words:
Gypsy; LTR Retrotransposon; Interspersed Repeat; Gypsy superfamily; endogenous retrovirus; gag; integrase; reverse transcriptase; Gypsy-28_DR; Gypsy-28-LTR_DR; Gypsy-28-I_DR
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Gypsy-28_DR, a family of LTR retrotransposons from zebrafish.
Journal:
Repbase Reports 5(5), 118-118 (2005)
Abstract:
Gypsy-28-I_DR is an internal portion of the Gypsy-28_DR LTR retrotransposon that belongs to the Gypsy superfamily. Its long terminal repeat is deposited in Repbase as Gypsy-28-LTR_DR. Gypsy-28_DR is characterized by varable 5-6-bp target site duplications. The internal portion encodes one polyprotein: the 1364-aa Gypsy-28_DR1p (pos. 18-4109) composed of the gag, protease, reverse transcriptase, and integrase domains.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2019 - Genetic Information Research Institute