Repbase Reports

2005, Volume 5, Issue 5
May 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 98

ALFARE1_I

M. sativa (alfalfa) putative retrotransposon, internal consensus.

Submitted:
31-May-2005
Accepted:
31-May-2005
Key Words:
LTR Retrotransposon; Interspersed Repeat
Source:
Medicago sativa
Organism:
Medicago sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Gentles,A. and Jurka,J.
Title:
M. sativa putative retrotransposon ALFARE1.
Journal:
Repbase Reports 5(5), 98-98 (2005)
Abstract:
There are only 4 complete copies of this element in currently available alfalfa sequence, along with numerous copies of the 1358 bp LTR. The complete elements are flanked by 5 bp target site duplications. Although the full-length copies contain several substantial ORFs, they have no similarity to any known proteins. Therefore it is not clear if this sequence represents a true autonomous retrotransposon.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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