Repbase Reports

2005, Volume 5, Issue 4
April 30, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 93

REP-1_SP

Interspersed repeat - a consensus sequence.

Submitted:
30-Apr-2005
Accepted:
30-Apr-2005
Key Words:
Interspersed Repeat; Non-autonomous; P-N1_SP; REP-1_SP
Source:
Strongylocentrotus purpuratus
Organism:
Strongylocentrotus purpuratus
Taxonomy:
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
REP-1_SP, a family of interspersed repeats in the sea urchin genome.
Journal:
Repbase Reports 5(4), 93-93 (2005)
Abstract:
The genome contains >3000 copies of REP-1_SP. The average divergence from the consensus sequences is 85%. Copies of REP-1_SP are usually truncated at their 5' end. REP-1_SP contains a tandem duplication of a 74-bp unit (pos. 200-273 and 274-349). This unit is also present in P-N1_SP. Classification of REP-1_SP is not clear.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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