Repbase Reports

2005, Volume 5, Issue 3
March 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 51

L1-6_CR

L1-6_CR is a 3' terminal portion of a L1-like non-LTR retrotransposon - a consensus.

Submitted:
30-Mar-2005
Accepted:
31-Mar-2005
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; putative L1 superfamily; L1-6_CR
Source:
Chlamydomonas reinhardtii
Organism:
Chlamydomonas reinhardtii
Taxonomy:
Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
L1-6_CR, a family of L1-like non-LTR retrotransposons from the green algae genome.
Journal:
Repbase Reports 5:(3) p.51 (2005)
Abstract:
The L1-6_CR elements are flanked by 5-10-bp target site duplications. There are several hundred copies of L1-6_CR present in the genome. They are massively truncated at 5'. Many elements are just 20-60 bp long 3' terminal portions. The consensus is not complete at its 5' end. Some copies are less than 0.5% divergent from the consensus sequence.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2019 - Genetic Information Research Institute