Repbase Reports

2005, Volume 5, Issue 2
February 28, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 45

hAT-2N_AG

This is a family of nonautonomous hAT DNA transposons - a consensus sequence.

Submitted:
00-Feb-2005
Accepted:
28-Feb-2005
Key Words:
Nonautonomous DNA transposon; hAT superfamily; 8-bp TSDs; TIR; hAT-2_AG; hAT-2N_AG
Source:
Anopheles gambiae
Organism:
Anopheles gambiae
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Anopheles
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
hAT-2N_AG, a family of nonautonomous DNA transposons from African malaria mosquito.
Journal:
Repbase Reports 5:(2) p.45 (2005)
Abstract:
hAT-2N_AG is a family of nonautonomous hAT transposons. It is characterized by 17-bp imperfect TIRs (4 mismatches) and 8-bp target-site duplications. The genome harbors ~30 copies of hAT-2N_AG that are less than 3% divergent from the consensus sequence. This family was derived from the autonomous hAT-2_AG. The hAT-2N_AG and hAT-2_AG consensus sequences share 90% identical 700-bp 5' and 90-bp 3' termini.
Derived:
[1] (consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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