Repbase Reports

2005, Volume 5, Issue 2
February 28, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 42

LINE-05_OS

Rice non-LTR retrotransposon - a consensus.

Submitted:
00-Feb-2005
Accepted:
28-Feb-2005
Key Words:
Non-LTR Retrotransposon; Interspersed Repeat; putative non-LTR retrotransposon; endonuclease; reverse transcriptase; LINE-05_OS
Source:
Oryza sativa
Organism:
Oryza sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza
[1] Authors:
Gentles,A. and Jurka,J.
Title:
Rice non-LTR retrotransposon consensus.
Journal:
Repbase Reports 5:(2) p.42 (2005)
Abstract:
Average similarity to consensus 98%. Sequence contains ORFs for complete endonuclease and reverse transcriptase domains. The 3' is well-defined with a poly-A tail, with at least 15 copies of the 3'-most 4kb of the element occurring in the rice genome. The 5' end is not well-defined, and target site duplications could not be determined.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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