Repbase Reports

2005, Volume 5, Issue 2
February 28, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 38

ENSPM3_OS

Rice En/Spm type autonomous DNA transposon, consensus.

Submitted:
00-Feb-2005
Accepted:
28-Feb-2005
Key Words:
autonomous DNA transposon; TIR; transposase; En/Spm superfamily; CACTA-type; ENSPM3_OS
Source:
Oryza sativa
Organism:
Oryza sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza
[1] Authors:
Gentles,A. and Jurka,J.
Title:
Rice DNA transposon ENSPM3_OS.
Journal:
Repbase Reports 5:(2) p.38 (2005)
Abstract:
There are 11 full-length copies of this DNA transposon in the rice genome with >93% similarity to the consensus. Generates 3 bp target site duplications; and has 23 bp imperfect TIRs. A 1073 codon ORF contains a conserved Tnp2 type transposase domain similar to that found in other En/Spm transposons. OSTE22 may be a non-autonomous subfamily of this autonomous element.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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