Repbase Reports

2005, Volume 5, Issue 2
February 28, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 30

COPIA1-I_OS

Rice copia-like LTR retrotranposon - internal consensus sequence.

Submitted:
00-Feb-2005
Accepted:
28-Feb-2005
Key Words:
copia-like retrotransposon; 6 bp TSDs; COPIA1-I_OS; integrase
Source:
Oryza sativa
Organism:
Oryza sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza
[1] Authors:
Gentles,A. and Jurka,J.
Title:
COPIA1_OS: Rice copia-type LTR retrotransposon.
Journal:
Repbase Reports 5:(2) p.30 (2005)
Abstract:
Closest related element is SZ-55. 6 bp TSDs, 1214 bp LTRs. There are around 13 complete copies in the rice genome, all more than 96% similar to the consensus.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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