Repbase Reports

2005, Volume 5, Issue 11
November 30, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 397

MARINER2_MD

MARINER2_MD - a putative Mariner transposon from Monodelphis domestica.

Submitted:
23-Oct-2005
Accepted:
30-Nov-2005
Key Words:
Mariner; DNA transposon; Interspersed Repeat; DDE transposase; MARINER2_MD
Source:
Monodelphis domestica
Organism:
Monodelphis domestica
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[2] Authors:
Gentles,A. and Jurka,J.
Title:
MARINER2_MD, an autonomous Mariner DNA transposon from M. domestica.
Journal:
Repbase Reports 5(11), 397-397 (2005)
Abstract:
The coding region of this Mariner transposon is interrupted; however, the presence of 25 bp TIRs and TA target site duplications suggest that this is the complete element. There are at least 1700 copies in the current assembly; similarity to the consensus of those used for reconstruction was 90%. This entry was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

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