Repbase Reports

2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 328

MUTRIM1

MuDR-like DNA transposon from Triticum monococcum.

Submitted:
01-Oct-2005
Accepted:
31-Oct-2005
Key Words:
MuDR; DNA transposon; Interspersed Repeat
Source:
Triticum monococcum
Organism:
Triticum monococcum
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Pooideae; Triticeae; Triticum
[2] Authors:
Jurka,J.
Title:
MUTRIM1: A DNA transposon from einkorn distantly related to MuDR-type transposon.
Journal:
Repbase Reports 5(10), 328-328 (2005)
Abstract:
The protein-coding region was described as "putative transposase" in ref. 1. This entry reports a full DNA transposon sequence distantly similar to Jittery and MUJITOS1. It includes 39 bp perfect TIRs, which can be expanded to 104 bp by allowing 11 base substitutions.
Derived:
Positions 398175 402872 Accession No AY485644 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Yan,L., Echenique,V., Busso,C., SanMiguel,P., Ramakrishna,W., Bennetzen,J.L., Harrington,S. and Dubcovsky,J.
    Cereal genes similar to Snf2 define a new subfamily that includes human and mouse genes.
    Mol Genet Genomics 268(4), 488-499 (2002)

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