Repbase Reports

2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 320

MARINER1_MD

MARINER1_MD - a putative Mariner transposon from Monodelphis domestica.

Submitted:
21-Oct-2005
Accepted:
31-Oct-2005
Key Words:
Mariner; DNA transposon; Interspersed Repeat; DNA binding domain; DDE transposase
Source:
Monodelphis domestica
Organism:
Monodelphis domestica
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[2] Authors:
Gentles,A. and Jurka,J.
Title:
MARINER1_MD, a Mariner DNA transposon from M. domestica.
Journal:
Repbase Reports 5(10), 320-320 (2005)
Abstract:
The putative protein coding part of this element occurs as an uninterrupted ORF in the Monodelphis genome assembly. That specific sequence has imperfect terminal inverted repeats. The termini reported here are the consensus reconstructed from numerous copies; and have canonical CA-TG ends. The element is flanked by TA target site duplications. This entry was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA.Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

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