Repbase Reports

2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 319

MAR1_MD

MAR1_MD, a tRNA-derived SINE element from Monodelphis domestica.

Submitted:
19-Oct-2005
Accepted:
31-Oct-2005
Key Words:
SINE; Interspersed Repeat; MAR1_MD; MAR1
Source:
Monodelphis domestica
Organism:
Monodelphis domestica
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[2] Authors:
Gentles,A. and Jurka,J.
Title:
MAR1_MD, a tRNA-derived, L1-mobilized SINE from the opossum M. domestica.
Journal:
Repbase Reports 5(10), 319-319 (2005)
Abstract:
Similar over 132 bp to SINE-1_MD, but appears to be L1-mobilized. The presence of a poly-A tail, and 15-16 bp TSDs suggests that L1 is the autonomous element. MAR1_MD has been highly prolific, with over 500,000 copies in the current genome assembly. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Monodelphis domestica sequencing consortium,.
    The Broad Institute of MIT and Harvard, Cambridge, MA, USA
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

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