Repbase Reports

2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 314

L1-5_MD

L1-5_MD, an old subfamily of LINE1 element from Monodelphis domestica - consensus sequence.

Submitted:
19-Oct-2005
Accepted:
31-Oct-2005
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; L1-5_MD
Source:
Monodelphis domestica
Organism:
Monodelphis domestica
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[2] Authors:
Gentles,A. and Jurka,J.
Title:
L1-5_MD, an old subfamily of L1 element from the opossum M. domestica.
Journal:
Repbase Reports 5(10), 314-314 (2005)
Abstract:
A partial consensus of an L1 element in opossum, that has only ~5400 copies in the version 2 genome assembly. The copies are around 22% diverged from the consensus. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

© 2001-2019 - Genetic Information Research Institute