Repbase Reports

2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 313

L1-4_MD

L1-4_MD, a subfamily of LINE1 element from Monodelphis domestica - consensus sequence.

Submitted:
19-Oct-2005
Accepted:
31-Oct-2005
Key Words:
L1; Non-LTR Retrotransposon; Interspersed Repeat; L1-4_MD
Source:
Monodelphis domestica
Organism:
Monodelphis domestica
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[2] Authors:
Gentles,A. and Jurka,J.
Title:
L1-4_MD, a subfamily of L1 element from the opossum M. domestica.
Journal:
Repbase Reports 5(10), 313-313 (2005)
Abstract:
Genomic copies of this fragment of L1 are ~80% similar to the consensus. There are approximately 198000 hits to this sequence in the current genome assembly, making it the most prolific of the L1s identified so far, in terms of number of copies. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

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