Repbase Reports

2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 296

BELPADRE_LTR

BEL-type LTR retrotransposon from Danio rerio - a consensus (LTR portion).

Submitted:
18-Oct-2005
Accepted:
31-Oct-2005
Key Words:
BEL; LTR Retrotransposon; Interspersed Repeat; Suzu-like; Pao/BEL
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[2] Authors:
Jurka,J.
Title:
BELPADRE: BEL-type LTR retrotransposon family from zebrafish (a consensus sequence).
Journal:
Repbase Reports 5(10), 296-296 (2005)
Abstract:
A fragment of this element was described in Ref. 1 (Genbank Acc. No. BK005574). This entry reports a full consensus sequence of this relatively young family. The closest relative in Repbase is CATCH1 from Takifugu rubripes.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Copeland,C.S., Mann,V.H., Morales,M.E., Kalinna,B.H. and Brindley,P.J.
    The Sinbad retrotransposon from the genome of the human blood fluke, Schistosoma mansoni, and the distribution of related Pao-like elements.
    BMC Evol Biol 5(1), 20-38 (2005)

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