Repbase Reports

2004, Volume 4, Issue 7
July 31, 2004
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 194

Novosib-N1

Novosib-N1 is a nonautonomous DNA transposon - a consensus.

Submitted:
00-Jul-2004
Accepted:
31-Jul-2004
Key Words:
DNA transposon; Novosib superfamily; 8-bp TSD; Novosib-1; Novosib-N1a; Novosib-N1
Source:
Chlamydomonas reinhardtii
Organism:
Chlamydomonas reinhardtii
Taxonomy:
Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Volvocales; Chlamydomonadaceae; Chlamydomonas
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Novosib-N1, a family of nonautonomous Novosib transposons from the green algae genome
Journal:
Repbase Reports 4:(7) p.194 (2004)
Abstract:
Novosib-N1 is a family of nonautonomous Novosib DNA transposons. It is composed of ~50 copies that are ~95% identical to their consensus sequence. Novosib-N1 elements are characterized by 8-bp target site duplications and by imperfect 17-bp terminal inverted repeats (3 mismatches). Novosib-N1 shares ~80% identical 5' 50-bp and 3' 250-bp termini with the Novosib-1 autonomous transposon. Therefore, transpositions of Novosib-N1 elements were mediated by a Novosib-like transposase.
Derived:
[1] (consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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