Repbase Reports

2004, Volume 4, Issue 12
December 31, 2004
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 311

ERVN1-I_DR

An internal portion of the ERVN1_DR nonautonomous endogenous retrovirus - a consensus sequence.

Submitted:
00-Dec-2004
Accepted:
31-Dec-2004
Key Words:
nonautonomous LTR retrotransposon; endogenous retrovirus; ERVN1_DR; ERVN1-LTR_DR; ERVN1-I_DR
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
ERVN1_DR, a miniature nonautonomous endogenomous retrovirus
Journal:
Repbase Reports 4:(12) p.311 (2004)
Abstract:
ERVN1-I_DR is an internal portion of the ERVN1_DR miniature nonautonomous endogenous retrovirus. Long terminal repeat of ERVN1_DR is deposited in Repbase as ERVN1-LTR_DR. Some copies of ERVN1_DR are flanked by identical LTRs. Average identity of ERVN1-I_DR copies to their consensus sequence is above 96%. The internal contains PBS complementary to the Phe-tRNA. ERVN1_DR is characterized by 5-bp target site duplications. Since there are no autonomous LTR retrotransposons similar to ERVN1_DR, its exact classification is not possible.
Derived:
[1] (consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2020 - Genetic Information Research Institute