Repbase Reports

2003, Volume 3, Issue 6
June 30, 2003
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 114

HELITRON1N_MT

HELITRON1N_MT, a nonautonomous rolling-circle DNA transposon - a consensus sequence.

Submitted:
30-Jun-2003
Accepted:
30-Jun-2003
Key Words:
Nonautonomous DNA transposon; HELITRON class; HELITRON1N_MT
Source:
consensus
Organism:
Medicago truncatula (barrel medic)
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids; eurosids I; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
HELITRON1N_MT, a nonautonomous rolling-circle DNA transposon in the Medicago truncatula genome.
Journal:
Repbase Reports 3:(6) p. 114 (2003)
Abstract:
HELITRON1N_MT is a nonautonomous roling-circle transposon. Some copies are less then 1% divergent from the consensus sequence. HELITRON1N_MT elements are inserted into the AT target site, and they have a 19-bp palindrome followed by the 12-bp 3' terminus. The M. truncatula genome harbors many families of Helitron transposons, including autonomous elements. Similar to autonomous Helitrons present in the A. thaliana and O. sativa genomes, autonomous Helitrons from M. truncatula encode the Rep/helicase and RPA1-like proteins.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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