Repbase Reports |
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| 2003, Volume 3, Issue 3 |
| March 31, 2003 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 65 |
piggyBac1_AG |
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piggyBac1_AG is an autonomous DNA transposon - a consensus sequence. |
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Submitted: 31-Mar-2003 |
Accepted: 31-Mar-2003 |
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Key Words: Nonautonomous DNA transposon; piggyBac superfamily; piggyBacN1_AG; piggyBac1_AG |
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Source: consensus |
Organism: Anopheles gambiae str. PEST |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Anopheles |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: piggyBac1_AG: a family of autonomous piggyBac-like DNA transposons from African malaria mosquito. |
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Journal: Repbase Reports 3:(3) p. 65 (2003) |
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Abstract: There are 5 copies of piggyBacN9_AG in the genome, they are ~98% identical to the consensus sequence. This family is characterized by the TTAA target site duplications, and by the 17-bp terminal inverted repeats (1 mismatch). The genome harbors several families of piggyBac-like elements. An ancestral form of piggyBac1_AG was directly related to the piggyBacN1_AG nonautonomous family. piggyBac1_AG encodes the 552-aa piggyBac1_AGp transposase (positions 1165-2820). piggyBac1_AGp: MLKKYNYQSIILSKLIVMTITQNLSNFQAQHITHDGTIWSSQPTIRRKILAHNILRSSQSGPTRKTEGLS IIKTFKLLMSDEMIDIIVRETNRKAQQIYEREQVTNSAKSASMHTWKTLTTSEFEAYLGILLLAGVMRSN YVHSTELWKTSSHPIFRATMSLQRFRSINRFIRFDDGRTREVRKEMDKSAAISDIFAMLNRNLQACYVAG SHVTVDEQLYPYRGGTGFTQYIPSKPAKYGIKVWWVCDAVTSYPIKGQIYTGLAPSGQRERHQGERVVKD LCRIFRGSGRSVICDIFFTSYNLASSLMSDFKLALLGTVNKRRTFVPPMFANPHGREIQSTLYGFSENIS ICSYIPKKNKSVVMLSTMHYDKDVQGPKEKPAMIIDYNKFKGGVDNMDKCLSEYSTKRKTNRWPLAFFFN ILDIAAFAAFKIYKENNLQNCQSTDYRRMFLQQLSEQLTMPEIQRRSENVQIMRHFGPRSGVESMLGGPL IALSKKNTTNDVEERDVSGRIKHKGNCYLCVKKRSTRKSCSTCKKPICTLHSVIKTSCKSCD
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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