Repbase Reports

2003, Volume 3, Issue 3
March 31, 2003
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 59

HATN4_AG

HATN4_AG is a hAT-like nonautonomous DNA transposon - a consensus sequence.

Submitted:
31-Mar-2003
Accepted:
31-Mar-2003
Key Words:
Nonautonomous DNA transposon; hAT superfamily; 8-bp TSD; HAT1_AG; HATN4_AG
Source:
consensus
Organism:
Anopheles gambiae str. PEST
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Anopheles
[1] Authors:
Kapitonov,V.V., Pavlicek,A. and Jurka,J.
Title:
HATN4_AG: a family of nonautonomous hAT-like DNA transposons from African malaria mosquito.
Journal:
Repbase Reports 3:(3) p. 59 (2003)
Abstract:
HATN4_AG is a family of nonautonomous DNA transposons that belongs to the hAT superfamily. HATN4_AG copies are ~5% divergent from the consensus sequence. HATN4_AG has 15-bp terminal inverted repeats. HATN4_AG has imperfect 11-bp terminal inverted repeats (3 mismatches). The nonautonomous HATN4_AG elements are related to the HAT1_AG autonomous transposon. These elements share the ~85% identical 450-bp 3' and 120-bp 5' termini, respectively. The genome harbors ~100 HATN4_AG elements.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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