Repbase Reports

2003, Volume 3, Issue 10
October 31, 2003
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 183

HARBINGER3N_DR

Nonautonomous Harbinger-like DNA transposon - a consensus.

Submitted:
31-Oct-2003
Accepted:
31-Oct-2003
Key Words:
Nonautonomous DNA transposon; Harbinger superfamily; HARBINGER3_DR; HARBINGER3N_DR
Source:
consensus
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Ostariophysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
HARBINGER3N_DR, a nonautonomous Harbinger-like DNA transposon from zebrafish.
Journal:
Repbase Reports 3:(10) p. 183 (2003)
Abstract:
HARBINGER3N_DR is a nonautonomous Harbinger-like DNA transposon, a deletion derivate of HARBINGER3_DR. The consensus sequence was built based on 100 copies that are ~98% identical to each other. This transposon is characterized by the CWG target site duplications and 12-bp terminal inverted repeats. Protein machinery encoded by HARBINGER3_DR was involved in transpositions of HARBINGER3N_DR nonautonomous elements. The genome harbors ~1000 copies of HARBINGER3N_DR that are ~96% identical to the consensus.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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