Repbase Reports

2002, Volume 2, Issue 6
June 30, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 12

HATN13_DR

HATN13_DR is a nonautonomous DNA transposon - a consensus.

Submitted:
30-Jun-2002
Accepted:
30-Jun-2002
Key Words:
Nonautonomous DNA transposon; hAT superfamily; Dr000152; Dr000342; HATN13_DR
Source:
consensus
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Ostariophysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio
[3] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
HATN13_DR, an ancient nonautonomous hAT-like DNA transposon from zebrafish.
Journal:
Repbase Reports 2:(6) p. 12 (2002)
Abstract:
HATN13_DR is a family of nonautonomous DNA transposons that belongs to the hAT superfamily [3]. Several thousand copies of HATN13_DR are expected to populate the zebrafish genome. The element was active long time ago, its copies are ~13% divergent from the consensus sequence. This element is characterized by 8-bp target site duplications and perfect 15-bp terminal inverted repeats.
Derived:
[3] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Bao,Z.
    Dr000342, an unclassified and uncharacterized repeat.
    http://www.genetics.wustl.edu/fish_lab/repeats/
  2. Bao,Z.
    Dr000152, an unclassified and uncharacterized repeat.
    http://www.genetics.wustl.edu/fish_lab/repeats/

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