Repbase Reports

2002, Volume 2, Issue 4
April 30, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 19

LOOPERN1_DR

LOOPERN1_DR is a nonautonomous DNA transposon - a consensus.

Submitted:
30-Apr-2002
Accepted:
30-Apr-2002
Key Words:
Nonautonomous DNA transposon; LOOPERN1_DR
Source:
consensus
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Ostariophysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
LOOPERN1_DR, a nonautonomous DNA transposon from zebrafish.
Journal:
Repbase Reports 2:(4) p. 19 (2002)
Abstract:
The consensus sequence was reconstructed based on 5 copies present in sequenced DNA that represents ~1% of the genome. Approximately 500 copies of LOOPERN1_DR are expected to populate the complete zebrafish genome. LOOPERN1_DR copies are 7% divergent from the consensus sequence. This element is characterized by 16-bp terminal inverted repeats and putative TTAA targets site duplications, LOOPERN1_DR. Its classification is not very certain yet, although it is expected to be a member of the piggyBac/Looper superfamily.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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