Repbase Reports

2002, Volume 2, Issue 4
April 30, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 14

HATN1_DR

HATN1_DR is a nonautonomous DNA transposon - a consensus.

Submitted:
30-Apr-2002
Accepted:
30-Apr-2002
Key Words:
Nonautonomous DNA transposon; hAT superfamily; HATN1_DR
Source:
consensus
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Ostariophysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio
[1] Authors:
Kapitonov,V.V.
Title:
HATN1_DR, ancient nonautonomous hAT-like DNA transposon from zebrafish.
Journal:
Repbase Reports 2:(4) p. 14 (2002)
Abstract:
The consensus sequence was reconstructed based on 40 copies present in sequenced DNA that represents ~1% of the genome. Several thousand copies of HATN1_DR are expected to populate the complete zebrafish genome. The element was active long time ago, its copies are ~10% divergent from the consensus sequence. The genome is populated by multiple subfamilies related to HATN1_DR. This element is characterized by 21-bp terminal inverted repeats and the 8-bp target site duplications.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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